I have confirmed with the Java Bean Spec 1.01 that either form is acceptable.  See 
http://java.sun.com/products/javabeans/docs/spec.html
And I looked at the code so I am pretty sure there is no way to choose.
I have an idea for a patch.
Can anyone tell me the best way to submit it?
Code:
--- tools/src/java/org/hibernate/tool/hbm2x/pojo/BasicPOJOClass.java    (revision 14167)
+++ tools/src/java/org/hibernate/tool/hbm2x/pojo/BasicPOJOClass.java    (working copy)
@@ -566,7 +566,11 @@
         * @return String
         */
        public String getGetterSignature(Property p) {
-               String prefix = c2j.getJavaTypeName( p, false).equals( "boolean" ) ? "is" : "get";
+               String prefix = "get";
+               if ( c2j.getJavaTypeName(p, false).equals( "boolean" ) ) {
+                       MetaAttribute bgp = p.getMetaAttribute("boolean-getter-prefix");
+                       prefix = (bgp == null) ? "is" : MetaAttributeHelper.getMetaAsString(bgp);
+               }
                return prefix + beanCapitalize( p.getName() );
        }
Then you can add
Code:
          <meta attribute="boolean-getter-prefix">get</meta>
and get what you want.